The i2b2 tranSMART Foundation is a global non-profit organization devoted to realizing the promise of translational biomedical research through development of the i2b2 and tranSMART knowledge management platforms.
This is the tranSMART project wiki. It has links to information of interest to tranSMART users, developers, contributors, and the entire tranSMART community. For more information about how the wiki is managed, or to contribute content to the wiki, see the Wiki Policies page.
The i2b2 project wiki can be found HERE.
If you need help you can reach the community and foundation via the options on the Getting Support page.
If you're looking for content from the old wiki that has not been migrated, you can find it at Legacy wiki.
|tranSMART 19.1 Release Notes|
21 June 2022: The tranSMART 19.1 beta release is in available for Postgres. An updated version for Oracle will follow when testing is completed.
To get started with 19.1, check the instructions to Install the tranSMART 19.1 release. The unsigned release artifacts can be found on the Foundation library server here. The Release Notes can be found here.
|tranSMART 19.0 Release|
21 April 2020: has been officially released for Postgres.
To get started with 19.0, check the instructions to Install the tranSMART 19.0 release. The unsigned release artifacts can be found on the Foundation library server here. The Release Notes can be found here when they have been completed
tranSMART 16.3 Release
and tranSMART 16.2 and 16.1
6 August 2018: released
|tranSMART Release 2017 Project Started|
30 March 2017: tranSMART Release 2017 PMC (Project Management Committee) has its first meeting
With the conclusion of the development project 17.1, the tranSMART Foundation has initiated the formal project to merge the innovations and extensions to the tranSMART Platform in to the latest Release 16.2 source tree.
More details on Release 2017 are available HERE.
|Administrator's Mailing List|
We have created a mailing list for administrators of tranSMART deployments. We will use this list to communicate directly with administrators to provide updates, important information on current and upcoming releases of the platform and to solicit suggestions for future versions.
Please use this link to add yourself to the Administrator's mailing list.
In particular, the regular Postgres demo installation is at now at http://postgres-demo.transmartfoundation.org/transmart This server is now running 19.1 Postgres. A release 19.1 test server with I2B2 demo data included can be found at http://postgres-test.transmartfoundation.org/transmart A developer test server for the latest code base is made available by Axiomedix on https://transmart-test.axiomedix.net/transmart
If you're trying to contact a server and cannot, please send an email to firstname.lastname@example.org for the current status.
|All news items||Old news items can be found here.|
|i2b2 tranSMART Foundation Home Page||The Foundation website has more information about the Foundation: its members, governance, and history, as well as information about the tranSMART Marketplace and other information of interest to both potential and current users.|
|A brief overview of the system and the i2b2 tranSMART Foundation|
|A more detailed overview of tranSMART, from the 2015 Bio-IT World in Boston|
|Licensing||Information about the licensing applicable to the platform|
|Use Cases||See how others are using tranSMART to advance their research.|
|tranSMART in the Literature||tranSMART in the scientific literature|
Using the Platform
|These publicly-available installations, pre-loaded with public data, are an easy way to get your hands on the system and see what it can do.|
|Installing tranSMART||There are several options for installing and running tranSMART in your own organization. These pages detail the various options including system requirements and detailed installation procedures.|
|Data Curators and Loaders||These pages contain guidance on how to organize data for loading into tranSMART, and instructions for the loading process itself. You will also find links to curated data sets that you can load into your own instance of tranSMART.|
|Sign up for monthly online training sessions provided by Foundation members Rancho Biosciences and Thomson Reuters, or browse video tutorials that you can view at your own pace. See this page for information about monthly training sessions, and links to videos of past sessions.|
|User's guides etc.|
|Optional Plugins||The community has developed a number of plugins that are available to all tranSMART users, but are not part of the base tranSMART installation. These pages contain information on these plugins, including how to install and use them.|
|Get help when things go wrong. Includes FAQs on common installation and configuration issues.|
Developing the platform
|Development Roadmap||What's going on with the development of the platform ?|
|tranSMART 17.1 Requirements Project||A project was initiated in Feb 2016 to develop detailed requirements, priorities, and implementation proposals for tranSMART release 17.1. The report and supporting materials for this project can be found here.|
|Technical Documentation||Documentation of interest to developers.|
|Quality Assurance||Information on how the system is tested, including test scripts, results, etc.|
|Development and Release-candidate test instances||These hosted instances are available for development and testing purposes only.|
TranSMART-related Committees and Working Groups
|The Product Management Committee meets monthly to review the status of the tranSMART platform, discuss developments and new feature requests, and to approve each release.|
|The monthly European Users call has attracted a wider audience and includes discussions on tranSMART and i2b2 and wider issues of European research.|
|Dell Project Team||Since 2020 we have received funding from Dell technologies for development of i2b2 and tranSMART, plus a series of related projects including the curation of clinical studies of COVID19 and related diseases for loading into tranSMART.|
|Legacy wiki||This wiki is being released along with v1.2.5 of tranSMART, at which time the old wiki will be set to read-only mode, and all new content will be added to this wiki|
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